The IMDb lists following films as being an "independent film."
| Rank | Title | Year | Director(s) | Overall Rank |
| 1 | Citizen Kane | 1941 | Orson Welles | 1 |
| 2 | Psycho | 1960 | Alfred Hitchcock | 9 |
| 3 | Dr. Strangelove or: How I Learned to Stop Worrying and Love the Bomb | 1964 | Stanley Kubrick | 14 |
| 4 | Apocalypse Now | 1979 | Francis Ford Coppola | 17 |
| 5 | Pulp Fiction | 1994 | Quentin Tarantino | 20 |
| 6 | One Flew over the Cuckoo's Nest | 1975 | Milos Forman | 37 |
| 7 | The Graduate | 1967 | Mike Nichols | 38 |
| 8 | Fargo | 1996 | Joel Coen | 50 |
| 9 | To Kill a Mockingbird | 1962 | Robert Mulligan | 57 |
| 10 | Blue Velvet | 1986 | David Lynch | 61 |
| 11 | The Usual Suspects | 1995 | Bryan Singer | 64 |
| 12 | Breathless | 1960 | Jean-Luc Godard | 77 |
| 13 | Reservoir Dogs | 1992 | Quentin Tarantino | 90 |
| 14 | Do the Right Thing | 1989 | Spike Lee | 106 |
| 15 | The Terminator | 1984 | James Cameron | 110 |
| 16 | Platoon | 1986 | Oliver Stone | 111 |
| 17 | American Beauty | 1999 | Sam Mendes | 123 |
| 18 | This Is Spinal Tap | 1984 | Rob Reiner | 127 |
| 19 | Trainspotting | 1996 | Danny Boyle | 128 |
| 20 | Amadeus | 1984 | Milos Forman | 141 |
| 21 | Seven | 1995 | David Fincher | 143 |
| 22 | Cabaret | 1972 | Bob Fosse | 148 |
| 23 | Monty Python and the Holy Grail | 1975 | Terry Gilliam and Terry Jones | 149 |
| 24 | Halloween | 1978 | John Carpenter | 160 |
| 25 | Dances with Wolves | 1990 | Kevin Costner | 165 |
| 26 | Night of the Living Dead | 1968 | George A. Romero | 168 |
| 27 | Mean Streets | 1973 | Martin Scorsese | 171 |
| 28 | Memento | 2000 | Christopher Nolan | 196 |
| 29 | The Piano | 1993 | Jane Campion | 203 |
| 30 | The English Patient | 1996 | Anthony Minghella | 214 |
| 31 | The Producers | 1968 | Mel Brooks | 217 |
| 32 | Field of Dreams | 1989 | Phil Alden Robinson | 219 |
| 33 | Withnail & I | 1987 | Bruce Robinson | 227 |
| 34 | Four Weddings and a Funeral | 1994 | Mike Newell | 241 |
| 35 | Blow-Up | 1966 | Michelangelo Antonioni | 253 |
| 36 | Magnolia | 1999 | Paul Thomas Anderson | 267 |
| 37 | Donnie Darko | 2001 | Richard Kelly | 269 |
| 38 | Dawn of the Dead | 1978 | George A. Romero | 273 |
| 39 | Carrie | 1976 | Brian De Palma | 275 |
| 40 | Eternal Sunshine of the Spotless Mind | 2004 | Michel Gondry | 278 |
| 41 | The Big Lebowski | 1998 | Joel Coen | 283 |
| 42 | Peeping Tom | 1960 | Michael Powell | 287 |
| 43 | The Texas Chainsaw Massacre | 1974 | Tobe Hooper | 298 |
| 44 | Scream | 1996 | Wes Craven | 305 |
| 45 | The Professional | 1994 | Luc Besson | 312 |
| 46 | Repulsion | 1965 | Roman Polanski | 348 |
| 47 | Lost in Translation | 2003 | Sofia Coppola | 353 |
| 48 | Being John Malkovich | 1999 | Spike Jonze | 356 |
| 49 | Hoop Dreams | 1994 | Steve James | 359 |
| 50 | Clerks. | 1994 | Kevin Smith | 361 |
| 51 | The Road Warrior | 1981 | George Miller | 370 |
| 52 | Hannah and Her Sisters | 1986 | Woody Allen | 372 |
| 53 | The Breakfast Club | 1985 | John Hughes | 381 |
| 54 | Dirty Dancing | 1987 | Emile Ardolino | 395 |
| 55 | Eraserhead | 1977 | David Lynch | 397 |
| 56 | Tom Jones | 1963 | Tony Richardson | 399 |
| 57 | Zulu | 1964 | Cy Endfield | 407 |
| 58 | The Blair Witch Project | 1999 | Daniel Myrick and Eduardo Sánchez | 417 |
| 59 | Bull Durham | 1988 | Ron Shelton | 419 |
| 60 | Mulholland Dr. | 2001 | David Lynch | 422 |
| 61 | A Man for All Seasons | 1966 | Fred Zinnemann | 428 |
| 62 | Boogie Nights | 1997 | Paul Thomas Anderson | 430 |
| 63 | Secrets & Lies | 1996 | Mike Leigh | 436 |
| 64 | Local Hero | 1983 | Bill Forsyth | 439 |
| 65 | A Room with a View | 1985 | James Ivory | 443 |
| 66 | A Nightmare on Elm Street | 1984 | Wes Craven | 451 |
| 67 | The Evil Dead | 1981 | Sam Raimi | 466 |
| 68 | Breaking the Waves | 1996 | Lars von Trier | 472 |
| 69 | Good Will Hunting | 1997 | Gus Van Sant | 474 |
| 70 | Requiem for a Dream | 2000 | Darren Aronofsky | 484 |
| 71 | Crimes and Misdemeanors | 1989 | Woody Allen | 488 |
| 72 | Sex, Lies, and Videotape | 1989 | Steven Soderbergh | 491 |
| 73 | Kill Bill: Vol. 1 | 2003 | Quentin Tarantino | 492 |
| 74 | Evil Dead II | 1987 | Sam Raimi | 495 |
| 75 | Blood Simple | 1984 | Joel Coen | 500 |
| 76 | The Crying Game | 1992 | Neil Jordan | 503 |
| 77 | The Player | 1992 | Robert Altman | 506 |
| 78 | Kes | 1969 | Ken Loach | 510 |
| 79 | Y tu mamá también | 2001 | Alfonso Cuarón | 523 |
| 80 | The Thin Blue Line | 1988 | Errol Morris | 525 |
| 81 | If.… | 1968 | Lindsay Anderson | 533 |
| 82 | All about My Mother | 1999 | Pedro Almodóvar | 534 |
| 83 | Stranger than Paradise | 1984 | Jim Jarmusch | 537 |
| 84 | A Woman under the Influence | 1974 | John Cassavetes | 540 |
| 85 | Mad Max | 1979 | George Miller | 543 |
| 86 | Picnic at Hanging Rock | 1975 | Peter Weir | 556 |
| 87 | Raising Arizona | 1987 | Joel Coen | 569 |
| 88 | The Sweet Hereafter | 1997 | Atom Egoyan | 576 |
| 89 | RoboCop | 1987 | Paul Verhoeven | 589 |
| 90 | Gallipoli | 1981 | Peter Weir | 590 |
| 91 | Short Cuts | 1993 | Robert Altman | 594 |
| 92 | Crumb | 1994 | Terry Zwigoff | 605 |
| 93 | Dazed and Confused | 1993 | Richard Linklater | 613 |
| 94 | Dont Look Back | 1967 | D.A. Pennebaker | 630 |
| 95 | Pink Flamingos | 1972 | John Waters | 631 |
| 96 | My Beautiful Laundrette | 1985 | Stephen Frears | 637 |
| 97 | Gregory's Girl | 1981 | Bill Forsyth | 642 |
| 98 | Shaun of the Dead | 2004 | Edgar Wright | 643 |
| 99 | Naked | 1993 | Mike Leigh | 658 |
| 100 | The Long Good Friday | 1980 | John Mackenzie | 663 |