| Rank | Title | Year | Director(s) | Overall Rank |
| 1 | Closely Watched Trains | 1966 | Jirí Menzel | 716 |
| 2 | The Shop on Main Street | 1965 | Ján Kadár and Elmar Klos | 916 |
| 3 | Kolya | 1996 | Jan Sverák | 1263 |
| 4 | The Firemen's Ball1 | 1967 | Milos Forman | 1381 |
| 5 | Loves of a Blonde | 1965 | Milos Forman | 1447 |
| 6 | The Bourne Identity2 3 | 2002 | Doug Liman | 1458 |
| 7 | Alice2 4 5 | 1988 | Jan Svankmajer | 1486 |
| 8 | Daisies | 1966 | Vera Chytilová | 1703 |
| 9 | Fantastic Planet6 | 1973 | René Laloux | 1812 |
| 10 | Casino Royale2 3 4 | 2006 | Martin Campbell | 1869 |
| 11 | Divided We Fall | 2000 | Jan Hrebejk | 1968 |
| 12 | Ecstasy7 | 1933 | Gustav Machatý | 2247 |
| 13 | Yentl3 4 | 1983 | Barbra Streisand | 2412 |
1 Joint production with Italy.
2 Joint production with (West) Germany.
3 Joint production with the United States.
4 Joint production with the United Kingdom.
5 Joint production with the Switzerland.
6 Joint production with France.
7 Joint production with Austria.