| Rank | Title | Year | Director(s) | Overall Rank |
| 1 | Spirited Away | 2001 | Hayao Miyazaki | 32 |
| 2 | Toy Story | 1995 | John Lasseter | 38 |
| 3 | WALL•E | 2008 | Andrew Stanton | 55 |
| 4 | The Lion King | 1994 | Roger Allers and Rob Minkoff | 92 |
| 5 | Beauty and the Beast | 1991 | Gary Trousdale and Kirk Wise | 106 |
| 6 | Up | 2009 | Pete Docter | 112 |
| 7 | Snow White and the Seven Dwarfs | 1937 | David Hand | 115 |
| 8 | My Neighbor Totoro | 1988 | Hayao Miyazaki | 144 |
| 9 | Finding Nemo | 2003 | Andrew Stanton | 163 |
| 10 | Toy Story 3 | 2010 | Lee Unkrich | 169 |
| 11 | The Iron Giant | 1999 | Brad Bird | 173 |
| 12 | Akira | 1988 | Katsuhiro Ôtomo | 175 |
| 13 | The Incredibles | 2004 | Brad Bird | 184 |
| 14 | Spider-Man: Into the Spider-Verse | 2018 | Bob Persichett, Peter Ramsey, and Rodney Rothman | 189 |
| 15 | Princess Mononoke | 1997 | Hayao Miyazaki | 205 |
| 16 | Grave of the Fireflies | 1988 | Isao Takahata | 210 |
| 17 | Pinocchio | 1940 | Hamilton Luske and Ben Sharpsteen | 224 |
| 18 | Who Framed Roger Rabbit | 1988 | Robert Zemeckis | 225 |
| 19 | Fantasia | 1940 | James Algar, Samuel Armstrong, Ford Beebe Jr., Norman Ferguson, David Hand, Jim Handley, T. Hee, Wilfred Jackson, Hamilton Luske, Bill Roberts, Paul Satterfield, and Ben Sharpsteen | 229 |
| 20 | The Nightmare before Christmas | 1993 | Henry Selick | 231 |
| 21 | Toy Story 2 | 1999 | John Lasseter | 256 |
| 22 | Inside Out | 2015 | Pete Docter | 276 |
| 23 | Ratatouille | 2007 | Brad Bird | 285 |
| 24 | Coco | 2017 | Lee Unkrich | 304 |
| 25 | Ghost in the Shell | 1995 | Mizuho Nishikubo and Mamoru Oshii | 324 |
| 26 | Monsters, Inc. | 2001 | Pete Docter | 327 |
| 27 | Persepolis | 2007 | Vincent Paronnaud and Marjane Satrapi | 334 |
| 28 | Shrek | 2001 | Andrew Adamson and Vicky Jenson | 338 |
| 29 | Bambi | 1942 | David Hand | 342 |
| 30 | How to Train Your Dragon | 2010 | Dean DeBlois and Chris Sanders | 347 |
| 31 | Waltz with Bashir | 2008 | Ari Folman | 367 |
| 32 | Aladdin | 1992 | Ron Clements and John Musker | 427 |
| 33 | Frozen | 2013 | Chris Buck and Jennifer Lee | 465 |
| 34 | Dumbo | 1941 | Ben Sharpsteen | 482 |
| 35 | The Little Mermaid | 1989 | Ron Clements and John Musker | 505 |
| 36 | The Lego Movie | 2014 | Phil Lord and Christopher Miller | 532 |
| 37 | Coraline | 2009 | Henry Selick | 552 |
| 38 | Fantastic Mr. Fox | 2009 | Wes Anderson | 564 |
| 39 | The Jungle Book | 1967 | Wolfgang Reitherman | 566 |
| 40 | South Park: Bigger Longer & Uncut | 1999 | Trey Parker | 578 |
| 41 | Howl's Moving Castle | 2004 | Hayao Miyazaki | 599 |
| 42 | Wallace & Gromit: The Curse of the Were-Rabbit | 2005 | Steve Box and Nick Park | 634 |
| 43 | The Triplets of Belleville | 2003 | Sylvain Chomet | 646 |
| 44 | Your Name | 2016 | Makoto Shinkai | 670 |
| 45 | Fantastic Planet | 1973 | René Laloux | 696 |
| 46 | Moana | 2016 | Ron Clements and John Musker | 702 |
| 47 | Nausicaä of the Valley of the Wind | 1984 | Hayao Miyazaki | 710 |
| 48 | Kiki’s Delivery Service | 1989 | Hayao Miyazaki | 740 |
| 49 | Big Hero 6 | 2014 | Don Hall and Chris Williams | 804 |
| 50 | Cinderella | 1950 | Clyde Geronimi, Wilfred Jackson, and Hamilton Luske | 817 |
| 51 | Lady and the Tramp | 1955 | Clyde Geronimi, Wilfred Jackson, and Hamilton Luske | 836 |
| 52 | Sleeping Beauty | 1959 | Clyde Geronimi | 847 |
| 53 | Zootopia | 2016 | Byron Howard and Rich Moore | 855 |
| 54 | Yellow Submarine | 1968 | George Dunning | 870 |
| 55 | One Hundred and One Dalmatians | 1961 | Clyde Geronimi, Hamilton Luske, and Wolfgang Reitherman | 885 |
| 56 | Mulan | 1998 | Tony Bancroft and Barry Cook | 917 |
| 57 | Paprika | 2006 | Satoshi Kon | 933 |
| 58 | Tangled | 2010 | Nathan Greno and Byron Howard | 952 |
| 59 | Chicken Run | 2000 | Peter Lord and Nick Park | 995 |
| 60 | Mary and Max | 2009 | Adam Elliot | 1019 |
| 61 | Laputa: Castle in the Sky | 1986 | Hayao Miyazaki | 1039 |
| 62 | Enchanted | 2007 | Kevin Lima | 1049 |
| 63 | Kubo and the Two Strings | 2016 | Travis Knight | 1058 |
| 64 | Ponyo | 2008 | Hayao Miyazaki | 1092 |
| 65 | Shrek 2 | 2004 | Andrew Adamson, Kelly Asbury, and Conrad Vernon | 1114 |
| 66 | Alice in Wonderland | 1951 | Clyde Geronimi, Wilfred Jackson, and Hamilton Luske | 1127 |
| 67 | Soul | 2020 | Pete Docter | 1130 |
| 68 | The Tale of Princess Kaguya | 2013 | Isao Takahata | 1148 |
| 69 | The Secret of NIMH | 1982 | Don Bluth | 1156 |
| 70 | Perfect Blue | 1997 | Satoshi Kon | 1162 |
| 71 | Wreck-It Ralph | 2012 | Rich Moore | 1242 |
| 72 | It's Such a Beautiful Day | 2012 | Don Hertzfeldt | 1276 |
| 73 | Despicable Me | 2010 | Pierre Coffin and Chris Renaud | 1285 |
| 74 | Watership Down | 1978 | Martin Rosen | 1287 |
| 75 | Peter Pan | 1953 | Clyde Geronimi, Wilfred Jackson, and Hamilton Luske | 1290 |
| 76 | Spider-Man: Across the Spider-Verse | 2023 | Joaquim Dos Santos, Kemp Powers, and Justin K. Thompson | 1292 |
| 77 | Ice Age | 2002 | Chris Wedge | 1309 |
| 78 | Kung Fu Panda | 2008 | Mark Osborne and John Stevenson | 1321 |
| 79 | How to Train Your Dragon 2 | 2014 | Dean DeBlois | 1386 |
| 80 | End of Evangelion | 1997 | Hideaki Anno | 1407 |
| 81 | Toy Story 4 | 2019 | Josh Cooley | 1448 |
| 82 | A Scanner Darkly | 2006 | Richard Linklater | 1449 |
| 83 | Only Yesterday | 1991 | Isao Takahata | 1477 |
| 84 | Waking Life | 2001 | Richard Linklater | 1514 |
| 85 | The Princess and the Frog | 2009 | Ron Clements and John Musker | 1520 |
| 86 | Hercules | 1997 | Ron Clements and John Musker | 1524 |
| 87 | Song of the Sea | 2014 | Tomm Moore | 1570 |
| 88 | Batman: Mask of the Phantasm | 1993 | Eric Radomski and Bruce W. Timm | 1575 |
| 89 | Incredibles 2 | 2018 | Brad Bird | 1582 |
| 90 | The Wind Rises | 2013 | Hayao Miyazaki | 1601 |
| 91 | The LEGO Batman Movie | 2017 | Chris McKay | 1632 |
| 92 | Corpse Bride | 2005 | Tim Burton and Mike Johnson | 1665 |
| 93 | The Adventures of Prince Achmed | 1926 | Lotte Reiniger | 1696 |
| 94 | Millennium Actress | 2001 | Satoshi Kon | 1716 |
| 95 | Isle of Dogs | 2018 | Wes Anderson | 1742 |
| 96 | Space Jam | 1996 | Joe Pytka | 1765 |
| 97 | The Secret of Kells | 2009 | Tomm Moore | 1769 |
| 98 | Whisper of the Heart | 1995 | Yoshifumi Kondô | 1775 |
| 99 | Duck Amuck | 1953 | Chuck Jones | 1783 |
| 100 | The Mitchells vs. the Machines | 2021 | Michael Rianda | 1794 |
| 101 | Brave | 2012 | Mark Andrews and Brenda Chapman | 1808 |
| 102 | A Bug's Life | 1998 | John Lasseter | 1841 |
| 103 | Lilo & Stitch | 2002 | Dean DeBlois and Chris Sanders | 1869 |
| 104 | Porco Rosso | 1992 | Hayao Miyazaki | 1902 |
| 105 | Tarzan | 1999 | Chris Buck and Kevin Lima | 1911 |
| 106 | Ernest & Celestine | 2012 | Stéphane Aubier, Vincent Patar, and Benjamin Renner | 1947 |
| 107 | James and the Giant Peach | 1996 | Henry Selick | 1955 |
| 108 | Rango | 2011 | Gore Verbinski | 1964 |
| 109 | The Emperor's New Groove | 2000 | Mark Dindal | 2019 |
| 110 | The Many Adventures of Winnie the Pooh | 1977 | John Lounsbery and Wolfgang Reitherman | 2027 |
| 111 | My Life as a Zucchini | 2016 | Claude Barras | 2030 |
| 112 | Wolfwalkers | 2020 | Tomm Moore and Ross Stewart | 2035 |
| 113 | Tokyo Godfathers | 2003 | Shôgo Furuya and Satoshi Kon | 2070 |
| 114 | Encanto | 2021 | Jared Bush and Byron Howard | 2102 |
| 115 | The Land before Time | 1988 | Don Bluth | 2136 |
| 116 | The Hunchback of Notre Dame | 1996 | Gary Trousdale and Kirk Wise | 2153 |
| 117 | Shaun the Sheep Movie | 2015 | Mark Burton and Richard Starzak | 2198 |
| 118 | Cars | 2006 | John Lasseter | 2239 |
| 119 | Anomalisa | 2015 | Duke Johnson and Charlie Kaufman | 2247 |
| 120 | Sita Sings the Blues | 2008 | Nina Paley | 2289 |
| 121 | Alice | 1988 | Jan Svankmajer | 2368 |
| 122 | The Jungle Book | 2016 | Jon Favreau | 2379 |
| 123 | Klaus | 2019 | Sergio Pablos | 2406 |
| 124 | The Wrong Trousers | 1993 | Nick Park | 2422 |
| 125 | The Prince of Egypt | 1998 | Brenda Chapman, Steve Hickner, and Simon Wells | 2446 |
| 126 | An American Tail | 1986 | Don Bluth | 2478 |
| 127 | The Illusionist | 2010 | Sylvain Chomet | 2498 |
| 128 | Pocahontas | 1995 | Mike Gabriel and Eric Goldberg | 2545 |
| 129 | The Secret World of Arrietty | 2010 | Hiromasa Yonebayashi | 2556 |
| 130 | How to Train Your Dragon: The Hidden World | 2019 | Dean DeBlois | 2570 |
| 131 | Ninja Scroll | 1993 | Yoshiaki Kawajiri | 2574 |
| 132 | Despicable Me 2 | 2013 | Pierre Coffin and Chris Renaud | 2600 |
| 133 | The King and the Mockingbird | 1980 | Paul Grimault | 2625 |
| 134 | The Great Mouse Detective | 1986 | Ron Clements, Burny Mattinson, David Michener, and John Musker | 2626 |
| 135 | The Rescuers | 1977 | John Lounsbery, Wolfgang Reitherman, and Art Stevens | 2627 |
| 136 | The Sword in the Stone | 1963 | Wolfgang Reitherman | 2634 |
| 137 | Heavy Metal | 1981 | Gerald Potterton | 2647 |
| 138 | Robin Hood | 1973 | Wolfgang Reitherman | 2672 |
| 139 | Metropolis | 2001 | Rintarô | 2721 |
| 140 | Happy Feet | 2006 | George Miller | 2747 |
| 141 | Frankenweenie | 2012 | Tim Burton | 2760 |
| 142 | Cloudy with a Chance of Meatballs | 2009 | Phil Lord and Christopher Miller | 2775 |
| 143 | The Breadwinner | 2017 | Nora Twomey | 2785 |
| 144 | The Aristocats | 1970 | Wolfgang Reitherman | 2791 |
| 145 | Winnie the Pooh | 2011 | Stephen J. Anderson and Don Hall | 2804 |
| 146 | Anastasia | 1997 | Don Bluth and Gary Goldman | 2814 |
| 147 | What's Opera, Doc? | 1957 | Chuck Jones | 2825 |
| 148 | When the Wind Blows | 1986 | Jimmy T. Murakami | 2845 |
| 149 | Onward | 2020 | Dan Scanlon | 2856 |
| 150 | How the Grinch Stole Christmas! | 1966 | Chuck Jones | 2870 |
| 151 | The Simpsons Movie | 2007 | David Silverman | 2884 |
| 152 | Raya and the Last Dragon | 2021 | Don Hall and Carlos López Estrada | 2920 |
| 153 | Flee | 2021 | Jonas Poher Rasmussen | 2921 |
| 154 | Finding Dory | 2016 | Andrew Stanton | 2959 |
| 155 | The Brave Little Toaster | 1987 | Jerry Rees | 2978 |
| 156 | Mind Game | 2004 | Masaaki Yuasa | 2987 |
| 157 | The Last Unicorn | 1982 | Jules Bass and Arthur Rankin Jr. | 2990 |
| 158 | The Fox and the Hound | 1981 | Ted Berman, Richard Rich, and Art Stevens | 3026 |