| Rank | Title | Year | Director(s) | Overall Rank |
| 1 | Toy Story | 1995 | John Lasseter | 50 |
| 2 | Spirited Away | 2001 | Hayao Miyazaki | 79 |
| 3 | WALL•E | 2008 | Andrew Stanton | 82 |
| 4 | Snow White and the Seven Dwarfs | 1937 | David Hand | 104 |
| 5 | The Lion King | 1994 | Roger Allers and Rob Minkoff | 138 |
| 6 | Beauty and the Beast | 1991 | Gary Trousdale and Kirk Wise | 154 |
| 7 | Finding Nemo | 2003 | Andrew Stanton | 168 |
| 8 | Up | 2009 | Pete Docter | 188 |
| 9 | Akira | 1988 | Katsuhiro Ôtomo | 204 |
| 10 | The Incredibles | 2004 | Brad Bird | 205 |
| 11 | My Neighbor Totoro | 1988 | Hayao Miyazaki | 230 |
| 12 | Pinocchio | 1940 | Hamilton Luske and Ben Sharpsteen | 233 |
| 13 | Toy Story 3 | 2010 | Lee Unkrich | 261 |
| 14 | Who Framed Roger Rabbit | 1988 | Robert Zemeckis | 264 |
| 15 | Princess Mononoke | 1997 | Hayao Miyazaki | 265 |
| 16 | Fantasia | 1940 | James Algar, Samuel Armstrong, Ford Beebe, Norman Ferguson, Jim Handley, T. Hee, Wilfred Jackson, Hamilton Luske, Bill Roberts, and Paul Satterfield | 266 |
| 17 | The Iron Giant | 1999 | Brad Bird | 296 |
| 18 | The Nightmare before Christmas | 1993 | Henry Selick | 297 |
| 19 | Toy Story 2 | 1999 | John Lasseter | 310 |
| 20 | Bambi | 1942 | David Hand | 311 |
| 21 | Grave of the Fireflies | 1988 | Isao Takahata | 329 |
| 22 | Shrek | 2001 | Andrew Adamson and Vicky Jenson | 353 |
| 23 | Ghost in the Shell | 1995 | Mamoru Oshii | 374 |
| 24 | Monsters, Inc. | 2001 | Pete Docter | 397 |
| 25 | Waltz with Bashir | 2008 | Ari Folman | 400 |
| 26 | South Park: Bigger Longer & Uncut | 1999 | Trey Parker | 407 |
| 27 | Ratatouille | 2007 | Brad Bird | 412 |
| 28 | Persepolis | 2007 | Vincent Paronnaud and Marjane Satrapi | 472 |
| 29 | The Jungle Book | 1967 | Wolfgang Reitherman | 474 |
| 30 | Inside Out | 2015 | Pete Docter | 494 |
| 31 | How to Train Your Dragon | 2010 | Dean DeBlois and Chris Sanders | 502 |
| 32 | Aladdin | 1992 | Ron Clements and John Musker | 535 |
| 33 | Wallace & Gromit: The Curse of the Were-Rabbit | 2005 | Steve Box and Nick Park | 563 |
| 34 | Howl's Moving Castle | 2004 | Hayao Miyazaki | 573 |
| 35 | The Triplets of Belleville | 2003 | Sylvain Chomet | 601 |
| 36 | Dumbo | 1941 | Ben Sharpsteen | 616 |
| 37 | The Little Mermaid | 1989 | Ron Clements and John Musker | 653 |
| 38 | Fantastic Mr. Fox | 2009 | Wes Anderson | 694 |
| 39 | Coraline | 2009 | Henry Selick | 717 |
| 40 | Fantastic Planet | 1973 | René Laloux | 728 |
| 41 | Yellow Submarine | 1968 | George Dunning | 731 |
| 42 | Nausicaä of the Valley of the Wind | 1984 | Hayao Miyazaki | 750 |
| 43 | One Hundred and One Dalmatians | 1961 | Clyde Geronimi, Hamilton Luske, and Wolfgang Reitherman | 755 |
| 44 | Coco | 2017 | Lee Unkrich | 809 |
| 45 | Lady and the Tramp | 1955 | Clyde Geronimi, Wilfred Jackson, and Hamilton Luske | 811 |
| 46 | Mary and Max | 2009 | Adam Elliot | 837 |
| 47 | Cinderella | 1950 | Clyde Geronimi, Wilfred Jackson, and Hamilton Luske | 847 |
| 48 | The Lego Movie | 2014 | Phil Lord and Christopher Miller | 918 |
| 49 | Frozen | 2013 | Chris Buck and Jennifer Lee | 940 |
| 50 | Chicken Run | 2000 | Peter Lord and Nick Park | 962 |
| 51 | Waking Life | 2001 | Richard Linklater | 970 |
| 52 | Sleeping Beauty | 1959 | Clyde Geronimi | 974 |
| 53 | Zootopia | 2016 | Byron Howard and Rich Moore | 1039 |
| 54 | Laputa: Castle in the Sky | 1986 | Hayao Miyazaki | 1058 |
| 55 | Spider-Man: Into the Spider-Verse | 2018 | Bob Persichett, Peter Ramsey, and Rodney Rothman | 1118 |
| 56 | Tangled | 2010 | Nathan Greno and Byron Howard | 1129 |
| 57 | Ice Age | 2002 | Chris Wedge | 1163 |
| 58 | Paprika | 2006 | Satoshi Kon | 1168 |
| 59 | Mulan | 1998 | Tony Bancroft and Barry Cook | 1190 |
| 60 | The Secret of NIMH | 1982 | Don Bluth | 1203 |
| 61 | Shrek 2 | 2004 | Andrew Adamson, Kelly Asbury, and Conrad Vernon | 1287 |
| 62 | Enchanted | 2007 | Kevin Lima | 1296 |
| 63 | Kiki’s Delivery Service | 1989 | Hayao Miyazaki | 1305 |
| 64 | Alice in Wonderland | 1951 | Clyde Geronimi, Wilfred Jackson, and Hamilton Luske | 1310 |
| 65 | Big Hero 6 | 2014 | Don Hall and Chris Williams | 1315 |
| 66 | Watership Down | 1978 | Martin Rosen | 1316 |
| 67 | Perfect Blue | 1997 | Satoshi Kon | 1317 |
| 68 | Despicable Me | 2010 | Pierre Coffin and Chris Renaud | 1324 |
| 69 | Kung Fu Panda | 2008 | Mark Osborne and John Stevenson | 1327 |
| 70 | A Scanner Darkly | 2006 | Richard Linklater | 1389 |
| 71 | Peter Pan | 1953 | Clyde Geronimi, Wilfred Jackson, and Hamilton Luske | 1396 |
| 72 | Duck Amuck | 1953 | Chuck Jones | 1469 |
| 73 | Alice | 1988 | Jan Svankmajer | 1561 |
| 74 | Your Name | 2016 | Makoto Shinkai | 1571 |
| 75 | Wreck-It Ralph | 2012 | Rich Moore | 1576 |
| 76 | End of Evangelion | 1997 | Hideaki Anno and Kazuya Tsurumaki | 1591 |
| 77 | Ponyo | 2008 | Hayao Miyazaki | 1608 |
| 78 | Pink Floyd the Wall | 1982 | Alan Parker | 1663 |
| 79 | A Bug's Life | 1998 | John Lasseter | 1689 |
| 80 | Porco Rosso | 1992 | Hayao Miyazaki | 1737 |
| 81 | Fritz the Cat | 1972 | Ralph Bakshi | 1782 |
| 82 | It's Such a Beautiful Day | 2012 | Don Hertzfeldt | 1783 |
| 83 | Moana | 2016 | Ron Clements and John Musker | 1804 |
| 84 | The Adventures of Prince Achmed | 1926 | Lotte Reiniger | 1821 |
| 85 | James and the Giant Peach | 1996 | Henry Selick | 1867 |
| 86 | Tokyo Godfathers | 2003 | Satoshi Kon | 1869 |
| 87 | The Wrong Trousers | 1993 | Nick Park | 1954 |
| 88 | How to Train Your Dragon 2 | 2014 | Dean DeBlois | 1988 |
| 89 | Corpse Bride | 2005 | Tim Burton and Mike Johnson | 1989 |
| 90 | Lilo & Stitch | 2002 | Dean DeBlois and Chris Sanders | 1994 |
| 91 | Kubo and the Two Strings | 2016 | Travis Knight | 1995 |
| 92 | The Secret of Kells | 2009 | Tomm Moore | 1999 |
| 93 | Whisper of the Heart | 1995 | Yoshifumi Kondo | 2004 |
| 94 | Only Yesterday | 1991 | Isao Takahata | 2051 |
| 95 | The Girl Who Leapt Through Time | 2006 | Mamoru Hosoda | 2053 |
| 96 | Anomalisa | 2015 | Duke Johnson and Charlie Kaufman | 2061 |
| 97 | Batman: Mask of the Phantasm | 1993 | Eric Radomski and Bruce W. Timm | 2094 |
| 98 | Robin Hood | 1973 | Wolfgang Reitherman | 2117 |
| 99 | The Land before Time | 1988 | Don Bluth | 2120 |
| 100 | Millennium Actress | 2001 | Satoshi Kon | 2133 |
| 101 | Antz | 1998 | Eric Darnell and Tim Johnson | 2155 |
| 102 | Rango | 2011 | Gore Verbinski | 2164 |
| 103 | The Princess and the Frog | 2009 | Ron Clements and John Musker | 2175 |
| 104 | The Tale of Princess Kaguya | 2013 | Isao Takahata | 2178 |
| 105 | Happy Feet | 2006 | George Miller | 2192 |
| 106 | When the Wind Blows | 1986 | Jimmy T. Murakami | 2261 |
| 107 | Ninja Scroll | 1993 | Yoshiaki Kawajiri | 2283 |
| 108 | Tarzan | 1999 | Kevin Lima and Chris Buck | 2288 |
| 109 | Cloudy with a Chance of Meatballs | 2009 | Phil Lord and Christopher Miller | 2343 |
| 110 | Song of the Sea | 2014 | Tomm Moore | 2345 |
| 111 | The Illusionist | 2010 | Sylvain Chomet | 2356 |
| 112 | The Emperor's New Groove | 2000 | Mark Dindal | 2369 |
| 113 | An American Tail | 1986 | Don Bluth | 2406 |
| 114 | The Wind Rises | 2013 | Hayao Miyazaki | 2422 |
| 115 | Brave | 2012 | Mark Andrews and Brenda Chapman | 2463 |
| 116 | Heavy Metal | 1981 | Gerald Potterton | 2492 |
| 117 | Incredibles 2 | 2018 | Brad Bird | 2505 |
| 118 | Space Jam | 1996 | Joe Pytka | 2525 |
| 119 | Anastasia | 1997 | Don Bluth and Gary Goldman | 2530 |
| 120 | Hercules | 1997 | Ron Clements and John Musker | 2549 |
| 121 | The Castle of Cagliostro | 1979 | Hayao Miyazaki | 2576 |
| 122 | The Rescuers | 1977 | John Lounsbery, Wolfgang Reitherman, and Art Stevens | 2586 |
| 123 | The Lord of the Rings | 1978 | Ralph Bakshi | 2599 |
| 124 | The Hunchback of Notre Dame | 1996 | Gary Trousdale and Kirk Wise | 2613 |
| 125 | The Many Adventures of Winnie the Pooh | 1977 | John Lounsbery and Wolfgang Reitherman | 2625 |
| 126 | Le Roman de Renard | 1937 | Irene and Wladyslaw Starewicz | 2628 |
| 127 | A Charlie Brown Christmas | 1965 | Bill Melendez | 2640 |
| 128 | Sita Sings the Blues | 2008 | Nina Paley | 2676 |
| 129 | The Brave Little Toaster | 1987 | Jerry Rees | 2685 |
| 130 | The Simpsons Movie | 2007 | David Silverman | 2711 |
| 131 | What's Opera, Doc? | 1957 | Chuck Jones | 2744 |
| 132 | Isle of Dogs | 2018 | Wes Anderson | 2757 |
| 133 | Pocahontas | 1995 | Mike Gabriel and Eric Goldberg | 2758 |
| 134 | Gertie the Dinosaur | 1914 | Winsor McCay | 2776 |